File adapter for SpecArray (.pepList) files. More...
#include <OpenMS/FORMAT/SpecArrayFile.h>
Public Member Functions | |
| SpecArrayFile () | |
| Default constructor. More... | |
| virtual | ~SpecArrayFile () |
| Destructor. More... | |
| template<typename FeatureMapType > | |
| void | load (const String &filename, FeatureMapType &feature_map) |
| Loads a SpecArray file into a featureXML. More... | |
| template<typename SpectrumType > | |
| void | store (const String &filename, const SpectrumType &spectrum) const |
| Stores a featureXML as a SpecArray file. More... | |
File adapter for SpecArray (.pepList) files.
The first line is the header and contains the column names:
m/z rt(min) snr charge intensity
Every subsequent line is a feature. Entries are separated by Tab (\t).
| SpecArrayFile | ( | ) |
Default constructor.
|
virtual |
Destructor.
|
inline |
Loads a SpecArray file into a featureXML.
The content of the file is stored in features.
| Exception::FileNotFound | is thrown if the file could not be opened |
| Exception::ParseError | is thrown if an error occurs during parsing |
References BaseFeature::setCharge(), Peak2D::setIntensity(), MetaInfoInterface::setMetaValue(), Peak2D::setMZ(), Peak2D::setRT(), and String::split().
Referenced by FileHandler::loadFeatures().
|
inline |
Stores a featureXML as a SpecArray file.
NOT IMPLEMENTED
| Exception::UnableToCreateFile | is thrown if the file could not be created |
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:31 using doxygen 1.8.5 |