#include <OpenMS/FORMAT/MzMLFile.h>#include <OpenMS/FORMAT/FeatureXMLFile.h>#include <OpenMS/FORMAT/TransformationXMLFile.h>#include <OpenMS/FORMAT/TraMLFile.h>#include <OpenMS/KERNEL/MRMTransitionGroup.h>#include <OpenMS/KERNEL/MRMFeature.h>#include <OpenMS/KERNEL/MSSpectrum.h>#include <OpenMS/KERNEL/MSChromatogram.h>#include <OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h>#include <OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h>#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/DataStructures.h>#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h>#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h>#include <OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h>#include <OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h>#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h>#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/Scoring.h>#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/MRMScoring.h>#include <OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h>#include <OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h>Go to the source code of this file.
Classes | |
| struct | OpenSwath_Scores |
| A structure to hold the different scores computed by the FeatureFinder. More... | |
| class | MRMFeatureFinderScoring |
| The MRMFeatureFinder finds and scores peaks of transitions that coelute. More... | |
Namespaces | |
| OpenMS | |
| Main OpenMS namespace. | |
Macros | |
| #define | run_identifier "unique_run_identifier" |
| #define | USE_SP_INTERFACE |
Functions | |
| bool | SortDoubleDoublePairFirst (const std::pair< double, double > &left, const std::pair< double, double > &right) |
| #define run_identifier "unique_run_identifier" |
Referenced by MRMFeatureFinderScoring::pickExperiment(), and MRMFeatureFinderScoring::scorePeakgroups_().
| #define USE_SP_INTERFACE |
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:23 using doxygen 1.8.5 |