#include <numeric>#include <map>#include <vector>#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/OpenSwathAlgoConfig.h>Go to the source code of this file.
Namespaces | |
| OpenSwath | |
| OpenSwath::Scoring | |
| Scoring functions used by MRMScoring. | |
Typedefs | |
Type defs | |
| typedef std::map< int, double > | XCorrArrayType |
| Cross Correlation array. More... | |
Functions | |
Helper functions | |
| OPENSWATHALGO_DLLAPI double | RMSD (double x[], double y[], int n) |
| Fxn "deltaRatioSum" from mQuest to calculate similarity between library intensity and experimental ones. More... | |
| OPENSWATHALGO_DLLAPI XCorrArrayType | calcxcorr (std::vector< double > &data1, std::vector< double > &data2, bool normalize) |
| Calculate crosscorrelation on std::vector data. More... | |
| OPENSWATHALGO_DLLAPI XCorrArrayType | normalizedCalcxcorr (std::vector< double > &data1, std::vector< double > &data2, int maxdelay, int lag) |
| Calculate crosscorrelation on std::vector data (which is first normalized) More... | |
| OPENSWATHALGO_DLLAPI XCorrArrayType | calcxcorr_new (std::vector< double > &data1, std::vector< double > &data2, int maxdelay, int lag) |
| Calculate crosscorrelation on std::vector data without normalization. More... | |
| OPENSWATHALGO_DLLAPI XCorrArrayType::iterator | xcorrArrayGetMaxPeak (XCorrArrayType &array) |
| Find best peak in an cross-correlation (highest apex) More... | |
| OPENSWATHALGO_DLLAPI void | standardize_data (std::vector< double > &data) |
| Standardize a vector (subtract mean, divide by standard deviation) More... | |
| OPENSWATHALGO_DLLAPI void | normalize_sum (double x[], unsigned int n) |
| divide each element of x by the sum of the vector More... | |
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:23 using doxygen 1.8.5 |