Used to load and store PTMXML files. More...
#include <OpenMS/FORMAT/PTMXMLFile.h>
Public Member Functions | |
| PTMXMLFile () | |
| Constructor. More... | |
| void | load (const String &filename, std::map< String, std::pair< String, String > > &ptm_informations) |
| Loads the informations of a PTMXML file. More... | |
| void | store (String filename, std::map< String, std::pair< String, String > > &ptm_informations) const |
| Stores the data in an PTMXML file. More... | |
Public Member Functions inherited from XMLFile | |
| XMLFile () | |
| Default constructor. More... | |
| XMLFile (const String &schema_location, const String &version) | |
| Constructor that sets the schema location. More... | |
| virtual | ~XMLFile () |
| Destructor. More... | |
| bool | isValid (const String &filename, std::ostream &os=std::cerr) |
| Checks if a file validates against the XML schema. More... | |
| const String & | getVersion () const |
| return the version of the schema More... | |
Additional Inherited Members | |
Protected Member Functions inherited from XMLFile | |
| void | parse_ (const String &filename, XMLHandler *handler) |
Parses the XML file given by filename using the handler given by handler. More... | |
| void | save_ (const String &filename, XMLHandler *handler) const |
Stores the contents of the XML handler given by handler in the file given by filename. More... | |
| void | enforceEncoding_ (const String &encoding) |
Protected Attributes inherited from XMLFile | |
| String | schema_location_ |
| XML schema file location. More... | |
| String | schema_version_ |
| Version string. More... | |
| String | enforced_encoding_ |
| Encoding string that replaces the encoding (system dependend or specified in the XML). Disabled if empty. Used as a workaround for XTandem output xml. More... | |
Used to load and store PTMXML files.
This class is used to load and store documents that implement the schema of PTMXML files.
| PTMXMLFile | ( | ) |
Constructor.
| void load | ( | const String & | filename, |
| std::map< String, std::pair< String, String > > & | ptm_informations | ||
| ) |
Loads the informations of a PTMXML file.
| filename | The name of the file |
| ptm_informations | the PTM information from the file are stored herein |
| FileNotFound | is thrown if the given file could not be found |
| ParseError | is thrown if the given file could not be parsed The information is read in and stored in the corresponding variables |
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:31 using doxygen 1.8.5 |